HLA Typing By NGS

Overview


HLA Genotyping for Safer Transplants and Personalized Care: Human Leukocyte Antigen (HLA) typing identifies specific HLA proteins on cell surfaces, critical markers that help the immune system distinguish self from foreign cells. The HLA system is fundamental to immune defense, enabling T cells to detect and respond to foreign antigens with precision. Highly polymorphic, with thousands of alleles identified, HLA genes influence disease defense, cancer susceptibility, and adverse drug reactions and are the leading cause of organ transplant rejection. Accurate, high-resolution HLA typing is essential for transplantation compatibility, disease association studies, and population genetics. Next-Generation Sequencing (NGS) has revolutionized HLA genotyping, delivering unmatched precision and reliability for identifying genetic variations. By leveraging NGS-based HLA typing, clinicians and researchers can ensure better transplant outcomes, uncover disease risk markers, and advance personalized medicine.

The HLA region, which is the most densely polymorphic region of the genome, can be sequenced accurately with our HLA typing NGS assay. The genomic DNA sample from blood is considered for library preparation and enrichment that further can be sequenced on NGS sequencer. Genes2Me’s HLA Typing NGS Assay generates unambiguous, phase-resolved results with critical insights into immune disorders, powered by advanced hybridization capture-based target enrichment for unmatched accuracy. It is a high-resolution allele identification and precision diagnostic assay that aids in the selection of the best donor for the recipient. DNA extracted from the blood of transplant recipients & donors is evaluated for histocompatibility antigens targeting 11 loci such as Class-1 HLA-A, B, C; Class II: HLA DPA1, DPB1, DQA1, DAQB1, DRB1/3/4/5. This panel targets the coding region compiling to the size of ~71kb.

Product key features & benefits


  • High-Resolution Allele Identification: Provides unambiguous, phase-resolved HLA typing for accurate donor-recipient matching and immune disorder insights.
  • Comprehensive Loci Coverage: Targets 11 critical HLA loci (Class I: HLA-A, B, C; Class II: DPA1, DPB1, DQA1, DQB1, DRB1/3/4/5) for complete histocompatibility analysis.
  • NGS-Powered Precision: Utilizes hybridization capture-based enrichment and sequencing for reliable detection in the most polymorphic genomic region.
  • Optimized for Transplant Compatibility: Enables precise donor selection, reducing graft rejection risk and improving transplant success rates.
  • Broad Clinical Applications: Supports transplantation, disease association studies, and population genetics with ~71 kb coding region coverage for high accuracy.

Panel Performance


Features Performance
Coverage uniformity (0.2X): >97%
Reproducibility (%): 98
Sensitivity (%): 95
On Target Ratio (%): 87-95

Panel Specifications


Parameter Description
Loci: 11
Covered Regions: Whole CDS
Target Size: 71 Kb
Mutation types: Allelic Polymorphism
Sample type: Blood
Platform compatibility : Illumina, Thermo Fisher (Ion Torrent), MGI, Element Biosciences

Process Workflow


panCan-work-flow

Ordering Information


Commercial Name Cat No. Pack Size Platform
HLA Typing NGS Test Kit G710014-1 24 T Illumina
G710014-2 96 T Illumina
G710014-3 96 T - EZY Illumina – EZY
HLA Typing NGS Test Kit G710014-4 24 T MGI
G710014-5 96 T MGI
G710014-6 96 T – EZY MGI – EZY
HLA Typing NGS Test Kit G710014-7 24 T Aviti
G710014-8 96 T Aviti
G710014-9 96 T – EZY Aviti – EZY
HLA Typing NGS Test Kit G710014-10 24 T Thermo
G710014-11 96 T Thermo
G710014-12 96 T – EZY Thermo – EZY

Resources


Download useful documents and technical information for the HLA Typing NGS Assays.

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