Lymphoma NGS Assay
lymphoid

Overview


Lymphoma is a type of blood cancer that affects the lymphatic system.

  • Lymphoma includes a diverse group of cancers originating from the abnormal clonal expansion of lymphocytes.
  • NSCLC It accounts for about 5% of all malignant cancers worldwide.
  • SCLC The overall survival rate for lymphoma patients is estimated at approximately 72%.
  • Lymphoma treatment is tailored to the specific type, stage, and presence of symptoms, and may include chemotherapy, radiotherapy, or targeted therapies.

Lymphoma is broadly classified into two main types - Hodgkin lymphoma and non-Hodgkin lymphoma, both of which originate in the lymphocytes, a type of white blood cell.

G2M lymphoma cancer panel includes key features
Comprehensive Coverage: Targets key genes implicated in Hodgkin and non-Hodgkin lymphomas.
Diagnostic, Prognostic & Therapeutic Insight: Identifies mutations that inform diagnosis, predict outcomes, and support treatment decisions.
High Sensitivity: Detects low-frequency somatic variants for accurate disease profiling.
DNA & RNA Analysis: Enables detection of both gene mutations and fusion transcripts in a single assay.
Optimized for Clinical Use: Designed to support personalized medicine and evidence-based care in lymphoid malignancies.

Panel Performance

Features Performance
Coverage uniformity (0.2X) >99%
Reproducibility (%) 96.3
Sensitivity (%) 97
On Target Ratio (%) 75-85

Panel Specifications


Number of Genes: 153 genes including DNA fusion
Gene count/family: ~75
Target Size: 0.62 Mb
Covered Regions: Whole Coding Sequence, hotspots
Mutation Types: SNV / InDels / CNVs/ DNA fusions
Sample Type: Blood
Platform Compatibility: Illumina, MGI, Thermo Fisher, Element Biosciences

Ordering Information


Commercial Name Cat No. Pack Size Platform
Lymphoma NGS Test Kit G710018-1 24 T Illumina
G710018-2 96 T Illumina
G710018-3 96 T – EZY Illumina – EZY
Lymphoma NGS Test Kit G710018-4 24 T MGI
G710018-5 96 T MGI
G710018-6 96 T – EZY MGI – EZY
Lymphoma NGS Test Kit G710018-7 24 T Aviti
G710018-8 96 T Aviti
G710018-9 96 T – EZY Aviti – EZY
Lymphoma NGS Test Kit G710018-10 24 T Thermo
G710018-11 96 T Thermo
G710018-12 96 T – EZY Thermo – EZY

PROCESS WORKFLOW

NGS workflow

Data Analysis and Reporting


Balanced Coverage of Critical Genes Reflects Robust Workflow:
Variant Distribution

Uniform Gene Coverage Across Lymphoma Samples:

Coverage analysis of key lymphoma associated genes (ALK, BRAF, ATM, and JAK3) demonstrates strong concordance between mean depth and median coverage, indicating minimal bias and uniform sequencing across target regions. This convergence reflects a robust and reliable assay validated across multiple lymphoma specimens.

Exceptional On-Target Performance Across Lymphoma Samples
Gene-wise coverage

On-target ratio across lymphoma patient samples:

All patient samples achieved more than 80% on-target alignment, reflecting the panel’s exceptional design precision, optimized assay performance, and highly efficient target capture ensuring reliable, high-quality sequencing efficiency.

Library Quality Assessment for Lymphoma NGS Panel
TB-Q Real Time PCR Kit

Bioanalyzer profile of the targeted sequencing library derived from the Seraseq Lymphoma DNA Mutation Mix. The validated workflow demonstrates consistent library size (~350 bp) and concentration (20–40 nM), indicative of robust preparation for NGS analysis.

Mutation Landscape of Top Lymphoma Genes:
Gene-wise coverage

Critical Gene Mutation Patterns in Lymphoma:

The Oncoplot shows the somatic mutation landscape of the top 18 lymphoma associated genes. Missense variants (blue) dominate, while multi-hit events (green) indicate multiple mutation types within the same gene. The right panel shows mutation frequency per gene.

Gene-Wise VAF Patterns Reveal Mutation Spectrum in Lymphoma:
Variant Distribution

Comparative VAF Profiles Across High Priority Genes:

Variant Allele Frequency (VAF) distribution across the top 18 lymphoma associated genes. Boxplots illustrate variability in VAF for each gene, with ALK, TP53, and WNK1 showing the highest ranges, indicating heterogeneity in mutation burden across samples.

Somatic Mutation Mapping in ALK and ATM Genes Highlights Hotspots Across Functional Domains:
Region Coverage

Lollipop Visualization of Mutation Hotspots in ALK and ATM:

The plots showing somatic mutation distribution in (A) ALK (mutation rate: 33.33%) and (B) ATM (mutation rate: 42.86%) genes. Missense mutations (green), frameshift insertions (purple), and frameshift deletions (orange) are mapped across functional domains.

Resources


Download useful documents and technical information for the lymphoma.

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